gatb::core Namespace Reference

Core package of the GATP project. More...

Namespaces
	bank
	Package for genomic databases management.
	debruijn
	Package for De Bruijn graph management.
	kmer
	Package for genomic databases management.
	system
	Operating System abstraction layer.
	tools
	Tools package.

Detailed Description

Core package of the GATP project.

The gatb::core package holds all the fundamental packages needed for writting assembly algorithms.

It holds some generic tools, like operating system abstraction, collections management or design patterns concerns. It also holds recurrent needs as reading genomic banks, handling kmers and so on.

The gatb::core package holds all the fundamental packages needed for writing assembly algorithms.

It holds some generic tools, like operating system abstraction, collections management or design patterns concerns. It also holds recurrent needs as reading genomic banks, handling kmers and so on.