impl Directory Reference

Directory dependency graph for impl:

Files
file	BankKmerIterator.hpp
	Kmer iterator on sequences of a bank.
file	BankKmers.hpp
	Kmer iterator on sequences of a bank.
file	BloomAlgorithm.hpp
	Bloom algorithm, ie. compute a Bloom filter from a set of reads.
file	BloomBuilder.hpp
	Build bloom filter from an iterator of kmers.
file	DebloomAlgorithm.hpp
	Debloom algorithm, ie. compute false positive sets for a Bloom filter.
file	DebloomAlgorithmFactory.hpp
	Factory for Debloom algorithms.
file	DebloomMinimizerAlgorithm.hpp
	Debloom algorithm, ie. compute false positive sets for a Bloom filter.
file	LinearCounter.hpp
	Linear counter for kmers using a bloom.
file	Model.hpp
	Kmer management.
file	RepartitionAlgorithm.hpp
	Repartition algorithm, ie. compute statistics on kmers.
file	Sequence2SuperKmer.hpp
file	SortingCountAlgorithm.hpp
	Counting kmers from a set of sequences.