gatb_core.hpp File Reference

Global header file. More...

#include <gatb/system/impl/System.hpp>
#include <gatb/tools/designpattern/impl/Observer.hpp>
#include <gatb/tools/designpattern/impl/Command.hpp>
#include <gatb/tools/designpattern/impl/IteratorHelpers.hpp>
#include <gatb/tools/collections/impl/BagCache.hpp>
#include <gatb/tools/collections/impl/BagFile.hpp>
#include <gatb/tools/collections/impl/BagPartition.hpp>
#include <gatb/tools/collections/impl/Bloom.hpp>
#include <gatb/tools/collections/impl/BloomGroup.hpp>
#include <gatb/tools/collections/impl/ContainerSet.hpp>
#include <gatb/tools/collections/impl/Hash16.hpp>
#include <gatb/tools/collections/impl/IteratorFile.hpp>
#include <gatb/tools/collections/impl/OAHash.hpp>
#include <gatb/tools/collections/impl/IterableHelpers.hpp>
#include <gatb/tools/storage/impl/Storage.hpp>
#include <gatb/tools/storage/impl/StorageTools.hpp>
#include <gatb/tools/misc/impl/Algorithm.hpp>
#include <gatb/tools/misc/impl/Histogram.hpp>
#include <gatb/tools/misc/impl/Progress.hpp>
#include <gatb/tools/misc/impl/Property.hpp>
#include <gatb/tools/misc/impl/TimeInfo.hpp>
#include <gatb/tools/misc/impl/Tool.hpp>
#include <gatb/tools/misc/impl/Stringify.hpp>
#include <gatb/tools/misc/impl/StringLine.hpp>
#include <gatb/tools/misc/impl/LibraryInfo.hpp>
#include <gatb/tools/misc/impl/Tokenizer.hpp>
#include <gatb/tools/math/NativeInt64.hpp>
#include <gatb/tools/math/NativeInt128.hpp>
#include <gatb/tools/math/LargeInt.hpp>
#include <gatb/bank/impl/Banks.hpp>
#include <gatb/bank/impl/Bank.hpp>
#include <gatb/bank/impl/BankHelpers.hpp>
#include <gatb/bank/impl/BankConverterAlgorithm.hpp>
#include <gatb/kmer/impl/Model.hpp>
#include <gatb/kmer/impl/BloomBuilder.hpp>
#include <gatb/kmer/impl/SortingCountAlgorithm.hpp>
#include <gatb/kmer/impl/DebloomAlgorithm.hpp>
#include <gatb/kmer/impl/BankKmers.hpp>
#include <gatb/kmer/impl/CountProcessor.hpp>
#include <gatb/debruijn/impl/Graph.hpp>
#include <gatb/debruijn/impl/Terminator.hpp>
#include <gatb/debruijn/impl/Traversal.hpp>
#include <gatb/debruijn/impl/Frontline.hpp>
#include <gatb/debruijn/impl/IterativeExtensions.hpp>
#include <gatb/debruijn/impl/BranchingAlgorithm.hpp>
#include <gatb/debruijn/impl/LinkTigs.hpp>
#include <gatb/debruijn/impl/ExtremityInfo.hpp>
#include <gatb/bcalm2/bcalm_algo.hpp>
#include <gatb/bcalm2/bglue_algo.hpp>
#include <gatb/tools/compression/RangeCoder.hpp>
#include <gatb/tools/compression/CompressionUtils.hpp>

Include dependency graph for gatb_core.hpp:

Detailed Description

Global header file.

Date

01/03/2013

Author

edrezen